| Jewish Educational Alliance of Savannah Georgia Inc | 501(c)(3) | 1952 | $5.2 million | $10.7 million | 2024-09 |
| Savannah Jewish Council Inc | 501(c)(3) | 1949 | $2.1 million | $12.8 million | 2024-09 |
| Old Savannah City Mission Inc | 501(c)(3) | 2002 | $1.7 million | $3.5 million | 2024-12 |
| Protestant Episcopal Church in the Diocese of Georgia Inc | 501(c)(3) | 1971 | $1.1 million | $15.2 million | 2024-12 |
| Africa Development Mission | 501(c)(3) | 2009 | $877,525 | $222,013 | 2024-12 |
| Band of Brothers Ministries Inc | 501(c)(3) | 2025 | $277,183 | $52,115 | 2025-12 |
| Maritime Bethel of Savannah Inc | 501(c)(3) | 2019 | $274,946 | $425,461 | 2025-12 |
| Unto the Least of His Inc | 501(c)(3) | 2023 | $252,397 | $214,689 | 2025-12 |
| Iglesia de Dios El Renuevo the Rebirth Church of God Inc | 501(c)(3) | 2021 | $207,183 | $47,816 | 2023-12 |
| Chatham Transitional Ministries Inc | 501(c)(3) | 2018 | $199,804 | $430,369 | 2025-12 |
| Islamic Center of Savannah Inc | 501(c)(3) | 2002 | $174,833 | $265,279 | 2024-12 |
| Savannah Church of Christ Inc | 501(c)(3) | 2003 | $168,330 | $165,800 | 2025-12 |
| Ligare Inc | 501(c)(3) | 2022 | $154,602 | $38,940 | 2025-12 |
| Iglesia Pentecostal Ejercito de Poder | 501(c)(3) | 2019 | $146,230 | $8,452 | 2023-12 |
| African Holiness Missions | 501(c)(3) | 2006 | $143,412 | $42,511 | 2025-12 |
| Society for the Preservation of the Book of Common Prayer | 501(c)(3) | 2007 | $112,130 | $107,647 | 2025-12 |
| Redeem Fellowship Christian Center | 501(c)(3) | 2001 | $111,462 | $1,618 | 2025-12 |
| Karam Fellowship Incorporated | 501(c)(3) | 2020 | $99,344 | $92,795 | 2025-12 |
| Faith Hope & Love Center Inc | 501(c)(3) | 2024 | $78,246 | $52,150 | 2025-12 |
| Savannah Area Interfaith Justice Ministry-Saijm | 501(c)(3) | 2020 | $74,064 | $22,544 | 2025-12 |
| Victory Harvest Ministries of Savannah Inc | 501(c)(3) | 2002 | $73,534 | $2,512 | 2024-12 |
| Coastal Georgia Emmaus Inc | 501(c)(3) | 2019 | $59,350 | $24,060 | 2025-12 |
| Anglican Music Publishing Company Inc | 501(c)(3) | 2023 | $36,596 | $16,209 | 2025-12 |
| S O Bulloch Jr Ministries | 501(c)(3) | 2006 | $29,172 | $73 | 2023-12 |
| Ab L Ministries Inc | 501(c)(3) | 2000 | | | |
| Ab L V | 501(c)(3) | 2017 | | | |
| Abyssinia Baptist Church Inc | 501(c)(3) | 1996 | | | |
| Ambassadors of Christ Ministries | 501(c)(3) | 2022 | | | |
| Anchored in Christ Ministries Inc | 501(c)(3) | 2010 | | | |
| Anglican Campus Fellowship | 501(c)(3) | 2015 | $0 | $0 | 2025-12 |
| Ark Church - Savannah Inc | 501(c)(3) | 2025 | | | |
| Asbury Memorial Church | 501(c)(3) | 2022 | | | |
| Belong Co | 501(c)(3) | 2026 | | | |
| Berean Missionary Baptist Association | 501(c)(3) | 2003 | | | |
| Bethel African Methodist Episcopal Church | 501(c)(3) | 2004 | | | |
| Bethel Missionary Baptist Church | 501(c)(3) | 2006 | | | |
| Bethlehem Missionary Baptist Church | 501(c)(3) | 2005 | | | |
| Bible Baptist Church Inc | 501(c)(3) | 2001 | | | |
| Body of Christ Inc | 501(c)(3) | 2021 | $0 | $0 | 2023-12 |
| Book of Life Outreach Ministry | 501(c)(3) | 2002 | | | |
| Branded Hearts Ministries Christian Center | 501(c)(3) | 2000 | | | 2010-12 |
| CPC of the Wmm-Savannah Ga - One Inc | 501(c)(3) | 2015 | | | |
| Calvary Chapel of Savannah | 501(c)(3) | 1997 | | | |
| Camp Fearless Inc | 501(c)(3) | 2024 | | | |
| Catherine Jones Ministries Inc | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| Central Missionary Baptist Church - Old Fort | 501(c)(3) | 2023 | | | |
| Chabad of Savannah Inc | 501(c)(3) | 2019 | | | |
| Christ Memorial Baptist Church | 501(c)(3) | 2009 | | | |
| Church of Shim Corp | 501(c)(3) | 2026 | | | |
| City Church Savannah | 501(c)(3) | 2022 | | | |
| Come As You Are Deliverance International Ministries Inc | 501(c)(3) | 2022 | | | |
| Commissioned II Love Outreachministries and Center | 501(c)(3) | 2006 | | | |
| Community Bible Church of Savannah Inc | 501(c)(3) | 2012 | | | |
| Cornerstone Church Health & Evangelical Ministries | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Covenant By Design Christian Fellowship | 501(c)(3) | 2017 | | | |
| Dwelling Church Inc | 501(c)(3) | 2017 | | | |
| E320 Outreach Ministries Incorporat Ed | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| E412 Ministries Inc | 501(c)(3) | 2021 | | | |
| Elohim Christian Fellowship Inc | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Everlasting Life Christian Church Inc | 501(c)(3) | 2003 | | | |
| Faith Deliverance Apostolic Church Inc | 501(c)(3) | 2007 | | | |
| Faith Harvest Ministries | 501(c)(3) | 2000 | | | |
| Faith Hope Charity in Christ Evangelistic Ministries Inc | 501(c)(3) | 2005 | | | |
| Faith Hope Victory Church Center | 501(c)(3) | 2014 | | | |
| Faith To Glory Ministries Inc | 501(c)(3) | 2006 | | | |
| Family Nation Church International Inc | 501(c)(3) | 1996 | | | |
| Finding Real Freedom Ministries | 501(c)(3) | 2018 | | $2,554 | 2025-12 |
| First African Baptist Church of East Savannah Inc | 501(c)(3) | 2025 | | | |
| First Haitian Christian Church of Savannah | 501(c)(3) | 2023 | $0 | $0 | 2025-12 |
| First Mount Bethel Baptist Church | 501(c)(3) | 2006 | | | |
| First Mount Sinai Missionary | 501(c)(3) | 1999 | | | |
| First Union Baptist Church | 501(c)(3) | 2024 | | | |
| Flipper Chapel African Methodist Episcopal Church | 501(c)(3) | 2009 | | | |
| Freedom Mission Deliverance Center | 501(c)(3) | 1995 | | | |
| Glorify Miracle Deliverance Church of Christ Inc | 501(c)(3) | 2021 | $0 | $0 | 2025-12 |
| Gospel Center Incorporated | 501(c)(3) | 2018 | $0 | $0 | 2025-12 |
| Gospel of Light Deliverance Center | 501(c)(3) | 2019 | | | |
| Grace Bible Church of Savannah Inc | 501(c)(3) | 2020 | | | |
| Grace Full Gospel Church | 501(c)(3) | 1996 | | | |
| Grace Is Sufficient Fellowship Ministries | 501(c)(3) | 2006 | | | |
| Greater Grace Word Alive Ministries Inc | 501(c)(3) | 2024 | $0 | $0 | 2024-12 |
| Growing in Grace Ministries | 501(c)(3) | 2004 | | | |
| Hands of Christ Ministries Inc | 501(c)(3) | 2000 | $0 | $0 | 2025-12 |
| Hardeeville Church of Chirst | 501(c)(3) | 2010 | | | |
| Healing Hearts Outreach & Ministry A Divine Connection Inc | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Holy Zion Holiness Church | 501(c)(3) | 2003 | | | |
| Hope City Church Inc | 501(c)(3) | 2017 | | | |
| Hope Counseling and Discipleship Center Inc | 501(c)(3) | 2025 | | | |
| Iglesia Bautista Latinoamericana of Savannah Inc | 501(c)(3) | 2024 | | | |
| Iglesia de Restauracion Vivificame Inc | 501(c)(3) | 2023 | | | |
| International Bible Christian Fellowship Inc | 501(c)(3) | 1999 | $0 | $0 | 2025-06 |
| Jesus Christ Deliverance Tab Inc | 501(c)(3) | 2004 | | | |
| Jesus First Christian Community | 501(c)(3) | 2006 | | | |
| Kingdom Builders Inc | 501(c)(3) | 1999 | | | |
| Kingdom Life Christian Fellowship | 501(c)(3) | 2003 | | | |
| Kingdom Life Ministries Inc | 501(c)(3) | 2007 | | | |
| Kingdom Living Empowerment Ministries | 501(c)(3) | 2010 | | | |
| Lifebridge Church Inc | 501(c)(3) | 2008 | | | |
| Lion Cubs Savannah Foundation Inc | 501(c)(3) | 2025 | | | |
| Lisa Womble Ministries | 501(c)(3) | 2025 | | | |
| Little Bryan Baptist Church | 501(c)(3) | 2000 | | | |
| Living Word Fellowship Church Inc | 501(c)(3) | 2002 | | | |
| Local Church Inc | 501(c)(3) | 2024 | | | |
| Lotus Templar Inc | 501(c)(3) | 2023 | $0 | $0 | 2025-12 |
| Ministerio Apostolico Profetico Alabanza | 501(c)(3) | 2016 | | | |
| Ministerio Evangelistico Renacer Savannah Ga Inc | 501(c)(3) | 2025 | | | |
| Ministry Life Communication Inc | 501(c)(3) | 2026 | $0 | $0 | 2025-12 |
| Mountain of Holiness Church Inc | 501(c)(3) | 2015 | | | |
| Mt Zion Greater Faith Apostolicministries | 501(c)(3) | 2014 | | | |
| Naomis Daughters Arise | 501(c)(3) | 2026 | | | |
| New Afrikan Methodist Christian Church Inc | 501(c)(3) | 2009 | | | |
| New Beginning Community Development Center Inc | 501(c)(3) | 2019 | $0 | $0 | 2025-12 |
| New Birth Christian Center Inc | 501(c)(3) | 2003 | | | |
| New Generation Full Gospel Baptist Church | 501(c)(3) | 1997 | | | |
| New Life Faith and Family Church Inc | 501(c)(3) | 2025 | | | |
| New Life International Ministries Incorporated | 501(c)(3) | 2010 | | | |
| One God Ministries Inc | 501(c)(3) | 2022 | | | |
| Overcoming Faith Ministries | 501(c)(3) | 2016 | | | |
| Passionate One Ministries | 501(c)(3) | 2026 | | | |
| Paulette J Olasoji Ministries Inc | 501(c)(3) | 2017 | | | |
| Perfect Timing Today Inc | 501(c)(3) | 2019 | $0 | $0 | 2025-12 |
| Pilgram Baptist Church of Savannah | 501(c)(3) | 2024 | | | |
| Positive Youth Training Ministries Inc | 501(c)(3) | 2026 | | | |
| Prayer Temple of Savannahincorporated | 501(c)(3) | 2007 | | | |
| Purpose Empowerment Church International Inc | 501(c)(3) | 2021 | | | |
| Radiant Church Savannah Inc | 501(c)(3) | 1975 | | | |
| Reaping the Harvest Ministeries Inc | 501(c)(3) | 2004 | $0 | $0 | 2025-12 |
| Redeemed Christian Church of God - Glorious Cloud Assembly | 501(c)(3) | 2019 | | | |
| Reign King Winner Ministries International Inc | 501(c)(3) | 2021 | $0 | $0 | 2025-12 |
| Restoration Praise and Worship Tabernacle Faith Church Inc | 501(c)(3) | 2001 | | | |
| Resurrection Ministries of Christ Inc | 501(c)(3) | 2000 | | | |
| Resurrection Power House | 501(c)(3) | 2001 | | | |
| Revive Church of Savannah Inc | 501(c)(3) | 2017 | | | |
| Revivify Ministries Inc | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| Rise Up Church Inc | 501(c)(3) | 2022 | | | |
| Risen Life Christian Church Inc | 501(c)(3) | 2017 | | | |
| Sanctuary of Savannah Inc | 501(c)(3) | 1996 | | | |
| Savannah Chinese Christian Church Inc | 501(c)(3) | 2009 | | | |
| Savannah First Korean Church Inc | 501(c)(3) | 2026 | | | |
| Savannah Georgia Intercessors International Network Inc | 501(c)(3) | 2006 | $0 | $0 | 2025-12 |
| Savannah Kollel Inc | 501(c)(3) | 2024 | | | |
| Second African Baptist Church Inc | 501(c)(3) | 2024 | | | |
| Second Arnold Baptist Church | 501(c)(3) | 2004 | | | |
| Soaring Eagles Prophetic Ministry Inc | 501(c)(3) | 1996 | | | |
| South Georgia United Methodist Foundation Inc | 501(c)(3) | 1981 | | | |
| Spirit-Filled Life Enrichment Ministries | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| Spiritual House of the Lord | 501(c)(3) | 1996 | | | |
| St James A M E Church | 501(c)(3) | 2005 | | | |
| St John Baptist Church | 501(c)(3) | 2016 | | | |
| St Pauls Greek Orthodox Church Inc | 501(c)(3) | 2022 | | | |
| St Pauls Hellenic and Cultural Foundation Inc | 501(c)(3) | 2017 | $0 | $111,862 | 2025-12 |
| St Philip Ame Church | 501(c)(3) | 2000 | | | |
| St Thomas Missionary Baptist Church | 501(c)(3) | 2025 | | | |
| Teshuvah Ministries Inc | 501(c)(3) | 2000 | $0 | $0 | 2023-12 |
| Thankful Baptist Church Inc | 501(c)(3) | 2007 | | | |
| The Celtic Church of Kite Inc | 501(c)(3) | 2026 | | | |
| The Seed Church Inc | 501(c)(3) | 2013 | | | 1994-12 |
| Thunderbolt Baptist Chuch | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Tim Malchak Ministries Inc | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| Transformation Center Church Inc | 501(c)(3) | 2005 | | | |
| Union Skidaway Baptist Church | 501(c)(3) | 2014 | | | |
| Unitarian Universalist Church of Savannah | 501(c)(3) | 2015 | | | |
| Unswitchable City-Wide Street Outreach Ministry Inc | 501(c)(3) | 2004 | | | |
| Walking Out the Word Ministries Inc | 501(c)(3) | 2022 | $0 | $0 | 2024-12 |
| West 35TH Prayer Temple and Hidden Manna Ministries Inc | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Women Blessing Women LTD | 501(c)(3) | 2023 | $0 | $0 | 2024-12 |
| Word First Christian Church | 501(c)(3) | 2009 | | | |
| You Are Not Forgotten Corporation | 501(c)(3) | 2017 | | $571 | 2025-12 |