| San Diego Tourism Marketing District | 501(c)(6) | 2009 | $52.8 million | $23 million | 2025-06 |
| CDC Small Business Finance Corp | 501(c)(3) | 2021 | $41.5 million | $178.9 million | 2025-12 |
| Civic San Diego | 501(c)(3) | 1980 | $34.2 million | $22.8 million | 2025-06 |
| Alliance for African Assistance | 501(c)(3) | 1991 | $12.8 million | $10.7 million | 2025-06 |
| National Associaton of Hispanic Real Estate Professionals | 501(c)(6) | 2013 | $12.6 million | $6.5 million | 2024-12 |
| California Life Sciences Association | 501(c)(6) | 2015 | $10.2 million | $10.1 million | 2024-12 |
| Building 178 Performing Arts Center | 501(c)(3) | 2021 | $8.6 million | $21.5 million | 2024-12 |
| Accessity | 501(c)(3) | 1996 | $8.5 million | $23.5 million | 2024-12 |
| FHCSD Holdings Inc | 501(c)(3) | 2025 | $7 million | $201.5 million | 2025-06 |
| LHCDC Impact Initiatives | 501(c)(3) | 2025 | $6.5 million | $6.6 million | 2025-09 |
| Civic Community Partners Inc | 501(c)(3) | 2014 | $5.3 million | $19.2 million | 2025-06 |
| City Heights Community Development Corporation | 501(c)(3) | 1982 | $4.4 million | $4.1 million | 2025-06 |
| National Electrical Contractors Association San Diego Chapter | 501(c)(6) | 1949 | $3.6 million | $10.1 million | 2025-12 |
| Up - Ipade Foundation Inc | 501(c)(3) | 2018 | $3.4 million | $79,803 | 2025-12 |
| La Maestra Foundation Inc | 501(c)(3) | 2014 | $2.8 million | $572,969 | 2024-12 |
| Asian Real Estate Association of America | 501(c)(6) | 2006 | $2.5 million | $2.4 million | 2024-12 |
| Logan Heights Community Development Corporation | 501(c)(3) | 1996 | $2.4 million | $9.4 million | 2025-09 |
| Rancho Carrillo Master Association | 501(c)(4) | 2001 | $2.2 million | $4.4 million | 2025-12 |
| California Supported Living Network | 501(c)(6) | 2009 | $2 million | $1.1 million | 2025-12 |
| Mid City Community Advocacy Network | 501(c)(3) | 2020 | $1.4 million | $2.3 million | 2024-12 |
| Cleantech San Diego Association | 501(c)(6) | 2009 | $1.4 million | $558,523 | 2025-06 |
| San Diego Organizing Project | 501(c)(3) | 2000 | $1.1 million | $911,192 | 2024-12 |
| Fitness Industry Suppliers Association-North America Inc | 501(c)(6) | 2003 | $1.1 million | $716,119 | 2026-02 |
| United Labor Center Inc | 501(c)(2) | 2010 | $1.1 million | $6.4 million | 2025-12 |
| Coral Reef Research Foundation Inc | 501(c)(3) | 1996 | $957,641 | $2.1 million | 2026-06 |
| My Brothers Keeper Transitional Housing | 501(c)(3) | 2023 | $939,998 | $65,650 | 2024-12 |
| Evonexus | 501(c)(6) | 1999 | $884,459 | $331,264 | 2024-12 |
| San Diego Diplomacy Council | 501(c)(3) | 1980 | $855,366 | $614,422 | 2025-06 |
| Running Industry Association Inc | 501(c)(6) | 2022 | $797,879 | $47,487 | 2025-01 |
| Urban Collaborative Project | 501(c)(3) | 2015 | $767,255 | $188,447 | 2024-12 |
| Burnham Center for Community Advancement | 501(c)(3) | 2020 | $738,886 | $8.7 million | 2024-12 |
| Pacific Beach Community Development Corp | 501(c)(3) | 2002 | $704,056 | $230,281 | 2025-06 |
| Carpenters Assistance Relief Program | 501(c)(3) | 2024 | $670,907 | $541,470 | 2025-06 |
| San Diego Angels Inc | 501(c)(6) | 2010 | $666,273 | $784,334 | 2025-12 |
| Business Improvement District Foundation | 501(c)(3) | 1998 | $664,931 | $282,346 | 2025-06 |
| Del Sur Community Services Council | 501(c)(4) | 2005 | $627,999 | $331,348 | 2025-05 |
| College Area Economic Development Corporation | 501(c)(3) | 1996 | $617,396 | $213,698 | 2026-06 |
| Nonprofit Solutions | 501(c)(3) | 1997 | $610,393 | $202,190 | 2024-12 |
| Rise Urban Leadership Institute of San Diego | 501(c)(3) | 2014 | $575,655 | $137,879 | 2024-12 |
| San Diego French American Chamber of Commerce | 501(c)(6) | 2011 | $568,255 | $256,431 | 2024-12 |
| Cyber Center of Excellence Association | 501(c)(6) | 2015 | $566,047 | $520,468 | 2025-12 |
| San Diego Kiwanis Club Foundation | 501(c)(3) | 1955 | $549,469 | $6.6 million | 2025-09 |
| Retina World Congress | 501(c)(6) | 2016 | $542,435 | $1.1 million | 2025-12 |
| Ujf Holdings Corp | 501(c)(3) | 2002 | $510,136 | $3.2 million | 2025-06 |
| The Ebony Pearls Foundation of San Diego Inc | 501(c)(3) | 2020 | $491,833 | $236,974 | 2024-12 |
| San Diego Military Advisory Council | 501(c)(6) | 2005 | $489,533 | $334,009 | 2025-12 |
| Rancho Viejo Master Association | 501(c)(4) | 2012 | $488,537 | $323,620 | 2025-12 |
| Young Presidents Organization Inc | 501(c)(6) | 2013 | $469,585 | $164,829 | 2025-06 |
| San Diego Regional Economic Development Foundation | 501(c)(3) | 2002 | $455,364 | $334,770 | 2025-06 |
| North San Diego Business Chamber | 501(c)(6) | 2006 | $446,278 | $520,489 | 2025-06 |
| Peninsula Alliance | 501(c)(3) | 2018 | $443,002 | $21,048 | 2025-08 |
| Council for Supplier Diversity | 501(c)(3) | 2002 | $427,994 | $99,718 | 2024-12 |
| Credential Counselors & Analysts of California | 501(c)(6) | 2004 | $373,348 | $424,540 | 2025-12 |
| East Village Association Inc | 501(c)(3) | 2008 | $373,161 | $396,708 | 2025-06 |
| SDHC Building Opportunities Inc | 501(c)(3) | 2017 | $370,042 | $42,733 | 2025-06 |
| 450 MHZ Alliance | 501(c)(6) | 2015 | $360,872 | $300,325 | 2025-12 |
| San Diego Family Law Bar Association | 501(c)(6) | 2013 | $341,942 | $211,939 | 2025-12 |
| County of San Diego Black Chamber of Commerce | 501(c)(6) | 2011 | $315,833 | $64,694 | 2024-12 |
| Tma Bluetech | 501(c)(6) | 2015 | $312,904 | $141,791 | 2024-12 |
| Institute of Real Estate Management of the Natl Association of Realtors | 501(c)(6) | 1976 | $310,482 | $311,744 | 2025-12 |
| California State Chapter of National Assoc of Residential Prop | 501(c)(6) | 2011 | $281,202 | $121,966 | 2024-12 |
| Naturally San Diego | 501(c)(6) | 2021 | $280,165 | $126,756 | 2025-12 |
| Startup San Diego | 501(c)(3) | 2016 | $272,131 | $126,136 | 2024-12 |
| The Indus Entrepreneurs San Diego | 501(c)(6) | 2020 | $253,889 | $108,243 | 2025-12 |
| Open Mobile Alliance | 501(c)(6) | 2016 | $232,003 | $1.7 million | 2025-12 |
| Community Realignment Education Program | 501(c)(3) | 2021 | $230,414 | $2,118 | 2024-12 |
| San Diego Lions Welfare Foundation | 501(c)(3) | 1993 | $226,672 | $6 million | 2025-06 |
| Mission Hills B I D | 501(c)(6) | 2009 | $213,817 | $30,261 | 2025-06 |
| Mentor Discover Inspire Inc | 501(c)(4) | 2004 | $207,423 | $184,953 | 2024-12 |
| Power of Love Foundation | 501(c)(3) | 2004 | $204,936 | $540,294 | 2025-12 |
| Design Forward Alliance | 501(c)(3) | 2017 | $158,074 | $56,350 | 2025-12 |
| Tom Homann LGBTQ Law Association | 501(c)(6) | 2023 | $155,306 | $76,592 | 2024-12 |
| Society for Management Information Systems | 501(c)(6) | 2001 | $149,692 | $182,792 | 2025-12 |
| Excutive Womens Golf Association Inc | 501(c)(6) | 1997 | $144,507 | $25,636 | 2025-12 |
| The Executives Association of San Diego | 501(c)(6) | 2021 | $144,500 | $132,785 | 2025-10 |
| Love Lindavistainc | 501(c)(3) | 2023 | $143,879 | $58,031 | 2025-12 |
| Historic Lincoln Heights Industrial Zone Economic Development Corp | 501(c)(3) | 2001 | $141,094 | $22,907 | 2025-12 |
| San Diego Womans Club Foundation | 501(c)(3) | 2022 | $140,441 | $3.5 million | 2024-05 |
| Wednesday Club | 501(c)(3) | 1938 | $137,567 | $451,553 | 2025-06 |
| TL Foundation | 501(c)(3) | 2022 | $127,787 | $905,298 | 2025-06 |
| San Diego La Raza Lawyers Association | 501(c)(6) | 2014 | $120,409 | $130,510 | 2024-12 |
| Urban Strategic Solutions | 501(c)(3) | 2016 | $120,026 | $131,593 | 2025-12 |
| Asian Real Estate Association of America Areaa San Diego Chapter | 501(c)(6) | 2010 | $117,529 | $56,105 | 2024-12 |
| Barrio Logan Association | 501(c)(3) | 2024 | $109,822 | $491,308 | 2025-12 |
| All for Logan | 501(c)(6) | 2022 | $96,737 | $13,230 | 2025-06 |
| Business for Good | 501(c)(3) | 2022 | $96,697 | $35,556 | 2024-12 |
| Rolando Community Council | 501(c)(3) | 2001 | $95,603 | $105,970 | 2025-09 |
| Mission Beach Womens Club Foundation | 501(c)(3) | 2011 | $92,809 | $43,377 | 2025-06 |
| I Am My Brothers Keeper CDC | 501(c)(3) | 2017 | $88,932 | $13,896 | 2025-12 |
| Columbia Community Foundation | 501(c)(3) | 2018 | $88,584 | $22,277 | 2025-06 |
| Group Relations International | 501(c)(3) | 2013 | $83,418 | $110,686 | 2025-12 |
| Redwood Shuffleboard and Bridge | 501(c)(7) | 2012 | $83,215 | $80,566 | 2025-12 |
| San Diego Association of Physicians of Indian Origin | 501(c)(6) | 2012 | $76,685 | $106,673 | 2025-12 |
| University City Community Assoc | 501(c)(4) | 2012 | $74,560 | $21,820 | 2025-12 |
| Areaa Twin Cities | 501(c)(6) | 2016 | $73,846 | $41,877 | 2026-03 |
| City Heights Town Council Inc | 501(c)(3) | 1995 | $68,920 | $154,261 | 2025-12 |
| Friends Of@gisd | 501(c)(3) | 2018 | $68,295 | $6.8 million | 2025-12 |
| California Pelagic Fisheries Association | 501(c)(6) | 2016 | $66,542 | $100,664 | 2025-12 |
| Optimist International | 501(c)(4) | 1956 | $64,724 | $52,345 | 2025-09 |
| Surety Association of San Diego | 501(c)(6) | 2021 | $64,136 | $19,360 | 2025-12 |
| Hindu Americans of San Diego | 501(c)(3) | 2020 | $63,982 | $50,468 | 2025-12 |
| Pacific Beach Town Council Inc | 501(c)(3) | 2009 | $60,945 | $251,708 | 2025-12 |
| Elles Collective Inc | 501(c)(3) | 2021 | $59,540 | $15,605 | 2024-12 |
| San Diego Defense Lawyers | 501(c)(6) | 1999 | $54,784 | $98,080 | 2024-12 |
| South Park Business Group Inc | 501(c)(6) | 2013 | $54,589 | $51,418 | 2025-09 |
| Opa Members Inc | 501(c)(6) | 2002 | $51,675 | $23,502 | 2025-12 |
| Federal Bar Association San Diego Chapter | 501(c)(6) | 2012 | $51,037 | $100,423 | 2025-12 |
| House of Puerto Rico San Diego | 501(c)(3) | 1999 | $44,663 | $41,281 | 2025-12 |
| San Diego Entrepreneurs Exchange | 501(c)(3) | 2012 | $42,430 | $52,316 | 2025-12 |
| American College of Healthcare Executives | 501(c)(6) | 1983 | $41,772 | $147,580 | 2025-12 |
| American Association of University Women La Mesa-El Cajon Ca FDN | 501(c)(3) | 2005 | $38,378 | $272,647 | 2026-06 |
| Professional Women in Insurance | 501(c)(6) | 2000 | $36,198 | $10,980 | 2025-12 |
| California Association of Zoos & Aquariums | 501(c)(6) | 2011 | $35,625 | $128,001 | 2025-12 |
| San Diego International Chapter Intl Personnel Management Assoc | 501(c)(6) | 2001 | $31,985 | $24,308 | 2025-06 |
| The Rancho de Los Penasquitos Town Council Inc | 501(c)(3) | 2007 | $31,948 | $11,953 | 2025-06 |
| Torrey Project | 501(c)(3) | 2019 | $31,915 | $1 | 2024-12 |
| Salaam Community | 501(c)(3) | 2018 | $30,660 | $49,988 | 2024-12 |
| Masonry Contractors Association of San Diego and Imperial Counties | 501(c)(6) | 2007 | $21,682 | $47,126 | 2024-12 |
| John G Watson Foundation Inc | 501(c)(3) | 2014 | $21,321 | $860,680 | 2025-12 |
| Novacomm | 501(c)(3) | 2010 | $20,001 | $2,974 | 2025-06 |
| Centro Binacional de Servicios Sociales Para La Comunidad | 501(c)(3) | 1995 | $12,960 | $10,010 | 2025-12 |
| Business for Good San Diego | 501(c)(6) | 2020 | $11,480 | $29,403 | 2024-12 |
| San Diego Life Sciences HR Network | 501(c)(6) | 2024 | $8,435 | $26,170 | 2025-12 |
| San Diego Region Small Business Development Corporation | 501(c)(3) | 2000 | $7,659 | $1.9 million | 2025-12 |
| Sustain Oc Foundation | 501(c)(3) | 2011 | $7,500 | $22,538 | 2024-12 |
| American Hunanese Association | 501(c)(3) | 2014 | $6,710 | $27,417 | 2024-12 |
| Natas PSW Foundation | 501(c)(3) | 2007 | $6,452 | $10,534 | 2025-08 |
| San Diego Regional Chamber Foundation | 501(c)(3) | 2009 | $6,113 | $149,459 | 2025-12 |
| San Diego Chinese-American Women S League | 501(c)(3) | 2008 | $1,260 | $13,725 | 2025-12 |
| 1C13 Inc | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| 1genhub Inc | 501(c)(3) | 2025 | | | |
| 92130 Cares | 501(c)(3) | 2021 | $0 | $0 | 2025-12 |
| Acuavita Foundation Inc | 501(c)(3) | 2014 | $0 | $0 | 2025-12 |
| Advertising Photographers of America San Diego | 501(c)(6) | 2019 | $0 | $0 | 2025-12 |
| African Development Action Network | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Ai for Kindness Inc | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Aiepc | 501(c)(6) | 2026 | $0 | $1 | 2025-12 |
| All San Diego Inc | 501(c)(3) | 2011 | $0 | $0 | 2025-12 |
| Alliance To the San Diego Regional Policy and Innovation Center | 501(c)(4) | 2024 | $0 | $0 | 2026-06 |
| Allied Gardens Community Council Inc | 501(c)(4) | 1999 | $0 | $0 | 2026-01 |
| American Institute of Certified Tax Planners | 501(c)(6) | 2023 | $0 | $1 | 2023-12 |
| American Lebanese Syrian Ladies Club of San Diego | 501(c)(3) | 2021 | $0 | $0 | 2025-12 |
| Areaa Columbus | 501(c)(6) | 2023 | $0 | $0 | 2024-12 |
| Areaa Greater Austin | 501(c)(6) | 2026 | | | |
| Areaa Greater Central Valley | 501(c)(6) | 2026 | | | |
| Areaa Salt Lake City | 501(c)(6) | 2026 | $0 | $0 | 2025-12 |
| Areaa Solano County | 501(c)(6) | 2019 | $0 | $0 | 2024-12 |
| Areaa Ventura County | 501(c)(6) | 2019 | $0 | $0 | 2025-12 |
| Artgenesis Foundation Inc | 501(c)(3) | 2024 | $0 | $0 | 2024-12 |
| Asian Real Estate Association of America -Areaa- Greater Orlando | 501(c)(4) | 2023 | $0 | $0 | 2026-02 |
| Asian Real Estate Association of America Inland Empire | 501(c)(6) | 2011 | $0 | $0 | 2025-12 |
| Associated Builders & Contractors of Ca Cooperation Committee Inc | 501(c)(6) | 2005 | $0 | $0 | 2025-09 |
| Association for the Advancement of Latinos in Sports | 501(c)(6) | 2026 | $0 | $0 | 2025-12 |
| Ballpark District Community Partnership | 501(c)(4) | 2025 | $0 | $362,811 | 2025-06 |
| Ballpark District Improvement | 501(c)(3) | 2026 | | | |
| Bankers Hill Community Group | 501(c)(3) | 2015 | $0 | $0 | 2026-06 |
| Bar Mitzvah Event Services Association | 501(c)(3) | 2019 | $0 | $0 | 2024-12 |
| Bay Park Community Council | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Beautiful PB | 501(c)(3) | 2014 | $0 | $0 | 2025-05 |
| Birthdays Without Borders | 501(c)(3) | 2024 | | | |
| Bitcoin Shocka | 501(c)(3) | 2022 | $0 | $0 | 2023-12 |
| Black American Policy Association of California San Diego Foundation | 501(c)(3) | 2023 | $0 | $0 | 2025-12 |
| Black Entrepreneurs Leaders & Learners | 501(c)(3) | 2021 | | $9,582 | 2025-12 |
| Broadway Heights Community Council | 501(c)(3) | 2014 | $0 | $0 | 2025-12 |
| Builders & Backers Network | 501(c)(6) | 2026 | | | |
| California Association for Nurse Practitioners San Diego Central | 501(c)(6) | 2014 | $0 | $0 | 2025-06 |
| California Association for Nurse Practitioners San Diego North Chap | 501(c)(4) | 2011 | $0 | $0 | 2024-06 |
| California Association of Licensed Repossessors Inc | 501(c)(6) | 2020 | $0 | $0 | 2025-12 |
| California Construction Labor-Management Cooperation Commi | 501(c)(6) | 2017 | $0 | $0 | 2025-09 |
| California State Chaper Womens Council of Realtors | 501(c)(6) | 2016 | $0 | $24,893 | 2025-12 |
| Chabad of Downtown Inc | 501(c)(3) | 2016 | $0 | $2.6 million | 2024-12 |
| Charles L Lewis III Foundation | 501(c)(3) | 2006 | $0 | $0 | 2025-06 |
| Clairemont Chamber of Commerce | 501(c)(6) | 2013 | $0 | $0 | 2025-12 |
| Claude H Morrison Temple Assocation | 501(c)(2) | 2014 | $0 | $0 | 2025-12 |
| Coaching Legends Selection Committee San Diego Hall of Champi | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| College Area Community Coalition | 501(c)(3) | 2019 | $0 | $0 | 2026-06 |
| College Area Community Garden | 501(c)(3) | 2015 | $0 | $0 | 2025-12 |
| College View Estates Association | 501(c)(3) | 2010 | $0 | $0 | 2025-12 |
| Communities in Action | 501(c)(4) | 2015 | $0 | $0 | 2024-12 |
| Community Business Incubator Inc Cbi | 501(c)(3) | 2012 | $0 | $0 | 2024-12 |
| Community Hands Network | 501(c)(3) | 2014 | $0 | $0 | 2025-12 |
| Community Home Neighborhood Maintenance & Development | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Connected As One Foundation | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Criminal Defense Bar Association of San Diego Inc | 501(c)(6) | 2022 | $0 | $0 | 2025-12 |
| Cytoscape Consortium | 501(c)(3) | 2014 | $0 | $0 | 2025-12 |
| Dames4games | 501(c)(3) | 2025 | | | |
| Downtown San Diego Business Improvement District Inc | 501(c)(6) | 2015 | $0 | $0 | 2025-06 |
| Downtown San Diego Clean and Safe | 501(c)(4) | 2015 | $0 | $0 | 2025-06 |
| Downtown San Diego Parking and Mobility Alliance Inc | 501(c)(3) | 2025 | | | |
| East Otay Mesa Property Owners Association | 501(c)(6) | 2007 | $0 | $0 | 2024-09 |
| East Village Community Development Corporation | 501(c)(3) | 2008 | $0 | $0 | 2025-12 |
| Edna Helps | 501(c)(3) | 2024 | $0 | $0 | 2024-04 |
| Eritrean Community Services of San Diego | 501(c)(3) | 1991 | $0 | $0 | 2025-12 |
| Eugene Bowman Economic Empowerment Center Inc | 501(c)(3) | 2003 | $0 | $0 | 2025-12 |
| Faith & Freedom Defense in Action Inc | 501(c)(4) | 2014 | $0 | $0 | 2025-12 |
| Federally Employed Women Inc | 501(c)(4) | 1973 | $0 | $0 | 2025-09 |
| Filipino American Chamber of Commerce Greater San Diego Foundat | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Filipino American Lawyers of San Diego Inc | 501(c)(6) | 2011 | $0 | $0 | 2025-12 |
| Financial Writers Society Inc | 501(c)(6) | 2015 | $0 | $0 | 2024-12 |
| Friends of Del Cerro | 501(c)(3) | 2016 | $0 | $0 | 2024-06 |
| Friends of Del Mar Mesa | 501(c)(3) | 2013 | $0 | $0 | 2025-12 |
| Friends of Fault Line Park | 501(c)(3) | 2024 | | | |
| Fuerza Amparo | 501(c)(3) | 2024 | $0 | $0 | 2024-12 |
| Gaslamp Quarter Alliance | 501(c)(3) | 2016 | $0 | $5,167 | 2025-06 |
| Give To Africa | 501(c)(3) | 2025 | $0 | $0 | 2025-06 |
| Go Global Mission | 501(c)(3) | 2026 | | | |
| Gr8ful Connections | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Gratitude Financial Services | 501(c)(3) | 2026 | | | |
| Harold K Brown Economic Development and Foundation Hbede | 501(c)(3) | 2024 | | | |
| Health Care Communicators of San Diego Inc | 501(c)(6) | 2006 | $0 | $0 | 2024-07 |
| Healthy Impact Community and Econom Ic Development Organization | 501(c)(3) | 2026 | $0 | $0 | 2021-12 |
| Heart of Bankers Hill | 501(c)(3) | 2023 | $0 | $0 | 2024-12 |
| Heritage Westminster | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Hillcrest Community Foundation | 501(c)(3) | 2022 | | $81,276 | 2025-06 |
| Historic Kensington San Diego | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Hoa Watchdog | 501(c)(3) | 2019 | $0 | $0 | 2025-12 |
| Home By Hearts | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Hotel Management Association of San Diego | 501(c)(6) | 2005 | $0 | $0 | 2025-12 |
| House of Colombia San Diego | 501(c)(3) | 2015 | $0 | $0 | 2025-12 |
| Housing Renaissance | 501(c)(6) | 2009 | $0 | $0 | 2025-12 |
| Hsu Legacy Foundation | 501(c)(3) | 2026 | | $400,101 | 2025-12 |
| Hugs & Bags A Love Movement | 501(c)(3) | 2014 | $0 | $0 | 2025-12 |
| Iamcp-United States Inc | 501(c)(6) | 2005 | | | |
| Ihsan Foundation USA | 501(c)(3) | 2026 | | | |
| Independent Music Merchants Group | 501(c)(6) | 2005 | $0 | $0 | 2025-12 |
| Investors Making A Difference | 501(c)(3) | 2023 | $0 | $0 | 2023-12 |
| Kensington Social & Athletic Club Inc | 501(c)(3) | 2026 | | | |
| Kensington Talmadge Business Association | 501(c)(6) | 2022 | $0 | $0 | 2025-12 |
| Kiwanis Club of Scripps Ranch Foundation | 501(c)(3) | 2025 | $0 | $0 | 2025-09 |
| Korean American Bar Association of San Diego | 501(c)(6) | 2017 | $0 | $0 | 2025-12 |
| Kufunga Pengo Inc | 501(c)(3) | 2022 | $0 | $0 | 2024-12 |
| Laboratory Robotics Interest Group San Diego Chapter | 501(c)(6) | 2024 | $0 | $0 | 2025-12 |
| Lighthouse Community Development Corporation | 501(c)(3) | 2015 | $0 | $0 | 2024-12 |
| Linda Vista Town Council | 501(c)(3) | 2018 | $0 | $0 | 2025-12 |
| Llewellyn Group Pathway Forward | 501(c)(3) | 2024 | | | |
| Love City Heights | 501(c)(3) | 2026 | | | |
| Love Thy Neighbor Movement | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| Love Urban Youth University | 501(c)(3) | 2018 | $0 | $0 | 2025-12 |
| Make the Finest City | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Miss Rodeo California Inc | 501(c)(4) | 1999 | $0 | $0 | 2024-06 |
| Mission Beach Town Council Inc | 501(c)(4) | 2004 | $0 | $0 | 2025-12 |
| Mon-Ark Estates Charity | 501(c)(3) | 2021 | $0 | $0 | 2024-12 |
| My Grey Matterz Inc | 501(c)(3) | 2017 | $0 | $0 | 2025-12 |
| Namc National Association of Minority Companies Inc | 501(c)(3) | 2013 | $0 | $0 | 2023-12 |
| Nami San Diego Independent Living Home Copper Hill LLC | 501(c)(2) | 2022 | $0 | $0 | 2025-06 |
| National Hispanic Construction Alli Ance | 501(c)(6) | 2026 | | | |
| Naval Base Coronado Cpo Mess | 501(c)(7) | 2023 | $0 | $0 | 2025-10 |
| Neighborhood Voices San Diego Inc | 501(c)(3) | 2021 | $0 | $0 | 2025-12 |
| Neighbors for A Better San Diego | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Neighbors for A Better San Diego Foundation | 501(c)(3) | 2023 | $0 | $0 | 2025-12 |
| Nereyiditas Foundation | 501(c)(3) | 2026 | | | |
| Nexis Hub | 501(c)(6) | 2025 | | | |
| Nick Young Memorial Foundation | 501(c)(3) | 2025 | | | |
| Normal Heights Community Garden | 501(c)(3) | 2025 | | | |
| Normal Heights for Smart Growth | 501(c)(3) | 2022 | | $1,059 | 2025-06 |
| North Park Buisness and Neighborhood Foundation | 501(c)(3) | 2019 | $0 | $0 | 2025-06 |
| Nu-Way Operation Black History Is Learning Development | 501(c)(3) | 2012 | $0 | $0 | 2025-08 |
| Oak Branch | 501(c)(3) | 2022 | $0 | $6,946 | 2024-12 |
| Organization of Networking Entrepreneurs Inc | 501(c)(3) | 2025 | | | |
| Organized Play Foundation | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Otay Mesa Property Owners Association | 501(c)(6) | 2009 | $0 | $0 | 2024-12 |
| Pacific Beach Village | 501(c)(3) | 2026 | | | |
| Pan Pacific Environmental Sustainable Green Building Associa | 501(c)(6) | 2012 | $0 | $0 | 2025-12 |
| Pits and Tits | 501(c)(3) | 2022 | $0 | $1,377 | 2023-12 |
| Poway Business Park Association | 501(c)(6) | 2002 | $0 | $0 | 2024-12 |
| Preserve Greater Golden Hill | 501(c)(3) | 2025 | | | |
| Pride in Housing Foundation Inc | 501(c)(3) | 2026 | $0 | $0 | 2025-12 |
| Professional Photographers of San Diego County Inc | 501(c)(6) | 2001 | $0 | $0 | 2025-12 |
| RBCC Foundation | 501(c)(3) | 2020 | $0 | $0 | 2026-06 |
| Rebikesd | 501(c)(3) | 2024 | $0 | $0 | 2024-12 |
| Redoma Dios Guarda Mi Lagrimas Inc | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Restoration Collective | 501(c)(3) | 2025 | | | |
| Rhythmical Miracles | 501(c)(3) | 2024 | $0 | $0 | 2025-04 |
| Rolando Park Community Council | 501(c)(3) | 2015 | $0 | $0 | 2025-12 |
| Rotary Club of Bajamar | 501(c)(3) | 2025 | | | |
| Rotary Club of Southeast San Diego | 501(c)(4) | 2015 | $0 | $0 | 2025-06 |
| Royal Guardian Party | 501(c)(3) | 2026 | $0 | $0 | 2025-12 |
| SVP 645 Volunteers | 501(c)(3) | 2016 | $0 | $0 | 2025-12 |
| San Diego & Imperial District Export Council | 501(c)(3) | 2023 | $0 | $0 | 2025-12 |
| San Diego Alliance for Asian Pacific Islander Americans Inc | 501(c)(3) | 2002 | $0 | $0 | 2025-12 |
| San Diego Americas Finest City Chapter | 501(c)(6) | 2013 | $0 | $0 | 2025-12 |
| San Diego Bicycle Collective | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| San Diego Chapter Risk Management Associates | 501(c)(6) | 2011 | $0 | $0 | 2025-08 |
| San Diego Childrens Coalition | 501(c)(3) | 2011 | $0 | $0 | 2025-12 |
| San Diego Chinese Association for Science and Technology | 501(c)(3) | 2013 | $0 | $0 | 2025-09 |
| San Diego Coalition for Public Plac Es | 501(c)(4) | 2026 | $0 | $0 | 2025-12 |
| San Diego Coastal Rotary Club | 501(c)(3) | 2016 | $0 | $0 | 2024-06 |
| San Diego Concierge Association | 501(c)(6) | 2020 | $0 | $0 | 2025-12 |
| San Diego Convention Corporation Inc | 501(c)(3) | 1989 | | | |
| San Diego County Ambulance Association | 501(c)(6) | 2011 | $0 | $0 | 2025-12 |
| San Diego County Hispanic Chamber of Commerce Benefit Fund | 501(c)(3) | 2021 | $0 | $0 | 2025-12 |
| San Diego Customs Brokers Association Inc | 501(c)(6) | 2023 | $0 | $0 | 2025-12 |
| San Diego Ethiopiam Community Incorporated | 501(c)(3) | 2015 | $0 | $0 | 2024-12 |
| San Diego Japanese Business Association Inc | 501(c)(6) | 2015 | $0 | $0 | 2025-12 |
| San Diego Korean Womens International Network | 501(c)(3) | 2016 | $0 | $0 | 2025-08 |
| San Diego Leadership Alliance Inc | 501(c)(3) | 2013 | $0 | $0 | 2025-12 |
| San Diego Professional Editors Network | 501(c)(6) | 2011 | $0 | $0 | 2024-12 |
| San Diego Professional Tour Guide Association | 501(c)(6) | 2020 | $0 | $0 | 2025-12 |
| San Diego Tourism Foundation | 501(c)(3) | 2024 | $0 | $0 | 2025-06 |
| San Diego Urban Wineries | 501(c)(6) | 2014 | $0 | $0 | 2025-12 |
| San Ysidro Community Collaborative | 501(c)(3) | 2026 | | | |
| Serra Mesa Community Council | 501(c)(3) | 2011 | $0 | $0 | 2025-12 |
| Short Term Rental Alliance of San Diego | 501(c)(6) | 2022 | $0 | $0 | 2024-12 |
| Small Business Bees Corp | 501(c)(3) | 2022 | $0 | $0 | 2024-12 |
| Smile and Paint | 501(c)(3) | 2024 | $0 | $0 | 2025-12 |
| Souls International LTD | 501(c)(3) | 2023 | $0 | $0 | 2025-12 |
| South Asian Bar Association of San Diego | 501(c)(6) | 2006 | $0 | $0 | 2025-06 |
| Southern California Compliance Group SCCG | 501(c)(4) | 2002 | $0 | $0 | 2025-12 |
| Stark Enterprises Foundation Inc | 501(c)(3) | 2015 | $0 | $0 | 2025-08 |
| Stop Cottwood Sandmine Org | 501(c)(4) | 2020 | $0 | $0 | 2025-12 |
| Taiwanese Chamber of Commerce of San Diego | 501(c)(6) | 2000 | $0 | $0 | 2026-08 |
| Talent Acquisition Network of San Diego | 501(c)(6) | 2025 | | | |
| Talmadge Community Association | 501(c)(3) | 2014 | $0 | $0 | 2026-06 |
| Talmadge Historical Society | 501(c)(3) | 2022 | | $4,563 | 2025-12 |
| Tamra Ministries | 501(c)(3) | 2025 | | | |
| The Asian Real Estate Association | 501(c)(6) | 2023 | $0 | $0 | 2024-12 |
| Tierrasanta Junior Womens Club Incorporated | 501(c)(4) | 2013 | $0 | $0 | 2025-12 |
| Timebank SD | 501(c)(3) | 2025 | | | |
| Together Imagine R Power | 501(c)(3) | 2022 | $0 | $0 | 2025-12 |
| Transformed Life Center | 501(c)(3) | 2015 | | | |
| Transportation Alliance Group | 501(c)(6) | 2015 | $0 | $0 | 2025-12 |
| Under the Computer Hood User Group Inc | 501(c)(3) | 2005 | $0 | $0 | 2024-12 |
| University City Community Foundation | 501(c)(3) | 2013 | $0 | $0 | 2023-12 |
| University Heights Community Association | 501(c)(3) | 2014 | $0 | $0 | 2025-10 |
| Uptown Partnership Inc | 501(c)(3) | 2000 | $0 | $0 | 2026-06 |
| Urban Corps Inc | 501(c)(3) | 2015 | $0 | $1 | 2025-06 |
| Van Aken Foundation | 501(c)(3) | 2025 | | $92,813 | 2024-12 |
| Water Tech Alliance | 501(c)(6) | 2019 | $0 | $0 | 2023-12 |
| Webster Heights Community Development Corporation | 501(c)(3) | 2019 | $0 | $0 | 2025-12 |
| Weddings of Distinction | 501(c)(6) | 2016 | $0 | $0 | 2025-12 |
| Winning Women Fellowship International | 501(c)(3) | 2019 | $0 | $0 | 2025-12 |
| Women in Tourism and Hospitality International With-It | 501(c)(3) | 2025 | $0 | $0 | 2025-12 |
| Young Risk Professionals of San Diego | 501(c)(6) | 2025 | $0 | $0 | 2025-12 |
| Zamzam Projects Inc | 501(c)(3) | 2025 | | | |
| San Diego Charitable Real Estate Foundation | 501(c)(3) | 1996 | $-674,052 | $183,691 | 2025-06 |
| Scottish Rite Cathedral of San Diego Inc | 501(c)(2) | 1966 | $-674,183 | $17.6 million | 2024-12 |
| Jacobs Center for Neighborhood Innovation | 501(c)(3) | 1996 | $-3,669,759 | $37.5 million | 2024-12 |